CDS

Accession Number TCMCG049C43303
gbkey CDS
Protein Id XP_034930037.1
Location join(27379..29434,29710..30526,31421..31711,32067..32283)
Gene LOC118060858
GeneID 118060858
Organism Populus alba

Protein

Length 1126aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA638679
db_source XM_035074146.1
Definition phytochrome A [Populus alba]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCTTCAAGGCCAAGCCACTCATCCAGCAATTCAGCAAGATCAAGACACAGTGCTAGGATTATTGCTCAGACCACTGTGGATGCCAAGCTCCATGCTGATTTTGAGGAGTCAGGCAGCTCTTTTGATTACTCAAGCTCAGTGCGTGTTACTGACTCAGTTGGTGGAGATCAGCCACCCAGGTCTGACAAAGTAACTACAGCTTATCTTCACCACATCCAGAAAGGCAAGCTGATCCAGCCTTTTGGATGCTTGCTAGCCTTAGATGAGAAAACTTTCAAAGTCATTGCATACAGTGAGAATGCCCCTGAACTGTTGACTATGGTCAGTCATGCAGTGCCAAGTGTTGGGGAACATCCTGTTCTTGGCATTGGAACTGACATCAGGACTATCTTCACTGCTCCTAGTGCATCTGCCTTGCAAAAAGCCATGGGATTTGGGGATGTTTCTCTTTTGAATCCTATATTGGTCCATTGCAAGACTTCTGGGAAGCCGTTTTATGCCATTGTTCACCGGGTGACTGGCAGTTTGATCATTGACTTTGAACCTGTGAAGCCTTACGAGGTTCCCATGACTGCTGCTGGAGCTCTACAATCATACAAGCTTGCAGCCAAAGCAATTACTCGGCTGCAGTCTTTGCCTAGTGGAAGCATGGAAAGGCTTTGTGATACAATGGTTCAGGAGGTTTTCGAGCTCACTGGATATGATAGGGCGATGGCCTATAAATTTCATGATGATGATCATGGAGAAGTGGTCTCTGAGGTTACAAAGCCAGGCATGGAGCCGTATTTGGGTTTGCACTATCCAGCCACTGATATCCCTCAGGCTTCACGCTTTCTATTTATGAAGAATAAAGTTCGAATGATTGTTGATTGTCATGCGAAACATGTCAAGGTGCTTCAGGATGAGAAGCTTCCATTTGATCTGACATTGTGTGGTTCAACCCTGAGGGCCCCACACAGTTGTCATTTACAATACATGGAGAACATGAACTCCATTGCTTCTCTGGTTATGGCAGTTGTAGTCAATGATGGGGATGAAGATGGTGATACCCCTGATTCTGCGAACCCACAGAAAAGAAAGAGACTTTGGGGTTTAGTAGTGTGCCATAATACCAGTCCGAGGTTTGTTCCGTTCCCTCTTAGGTATGCTTGTGAGTTTCTAGCTCAAGTATTTGCTATCCATGTCAACAAGGAATTGGAGTTAGAAAATCAAATTGTTGAGAAGAACATCCTCCGCACCCAGACACTCTTATGTGATATGCTCATGCGTGATGCACCATTAGGTATTGTGACACAGAGCCCGAACATTATGGATCTGGTAAAGTGTGATGGTGCTGTCCTGTTCTATAGGAATAAGATATGGAGGTTGGGAATAACTCCAAGTGATCTGCAGCTTCAGGATATAGCTTTTTGGCTTTCTGAGTATCATATGGATTCTACAGGTTTGAGTACAGACAGCTTGTATGATGCAGGGTACCCAGGGGCTCTGGCTCTTGGTGATGTAGTTTGTGGAATGGCAGCTGTGAGAATAACTTCCAAGGACATGCTTTTTTGGTTTCGATCCCAGACTGCTGCAGAAATTCGATGGGGTGGTGCAAAGCATGAACCAGGGGAGAAGGATGATGGAAGGAGAATGCACCCTAGGTCATCTTTCAAGGCCTTCCTTGAAGTTGTCAAGACAAGGAGTTTGCCTTGGAAGGACTATGAAATGGATGCAATCCATTCTCTGCAGCTTATCCTGAGGAACACATTCAAAGACATTGAAACCATGGATGTGGATACCAAAACAATTCATGCAAGGCTAAGCGACCTCAAAATTGAAGGGATGCAAGAACTTGAAGCAGTGACTAGTGAGATGGTCCGTTTAATTGAAACAGCTACAGTGCCAATTTTGGCAGTTGATGTTGATGGTCTAGTTAACGGGTGGAATACAAAAATTTCTGAATTGACTGGTCTTCTTGTTGATAAAGCAATTGGGAAGCATTTGCTAACACTTGTGGAAGATTCTTCGGTTGATATAGTCAAAAGAATGTTATTCTTGGCATTGCAGGGAAAAGAAGAGCAAAACATACAATTTGAAATCAAGACACATGGTTCCAAGTCTGAATGTGGCCCCATCTGCTTAGTTGTTAATGCCTGCGCAAGCAGGGACCTTCATGAAAATGTTGTGGGGGTGTGCTTTGTGGGTCAAGATATCACTGGCCAGAAGATGGTCATGGACAAGTTCACCCGAATTGAAGGGGATTACAAAGCAATTGTACAAAACCGGAACCCTTTGATTCCCCCAATATTTGGGACGGATGAGTTTGGCTGGTGTTCTGAGTGGAATCCTGCCATGACAAATTTGACTGGTTGGAAACGAGAAGAAGTTCTAGATAAAATGTTACTGGGAGAGGTTTTTGGGTTAAACATGGCATGCTGTCGTCTCAAGAATCAGGAGGCTTTTGTAAATCTCGGTGTTGTTCTTAACACTGCCATGACTGGCCTGGAATCCGAGAAGGTTTCTTTTGGTTTCTTTGCTCGGACTGGAAAGTATGTGGAATGCCTGCTGTGTGTGAGTAAGAAATTGGACAGAGAGGGTGCAGTCACTGGGGTATTCTGCTTTCTACAGCTTGCAAGCCAAGAGCTGCAACAAGCACTTCATGTCCAGCGATTATCAGAGCAAACTGCTTTGAAAAGACTGAAAGCATTGGCTTATTTAAAAAAGCAGATCCGGAATCCTCTCTCTGGAATTATATTTTCTGGCAAAATGATGGAGGGAACCGAGTTGGGAGCAGAACAAAAGGAGCTTCTGCATACCAGTGCCCAGTGCCAGTGCCAACTCAGCAAGATTCTTGATGACTCAGATCTCGATAGCATCATCGAAGGTTACTTGGATCTGGAAATGGTGGAGTTTACCCTGCGTGAGGTACTAGTGGCTGCTACCAGTCAAGTCATGATGAAGAGCAATGAAAAGGGCATTCGAATAATCAATGATGCAGCTGAAGAGATGATGGCTGAGACCTTATATGGTGATAGCATCAGGCTTCAACAGGTGTTGGCTGATTTCTTGCTGATGTCAGTTAATTTTACACCATCTGGAGGCCTGCTTACTGTTTCAGCTAGTTTCTCCAAAGACCAGTTGGGGCAATCTGTTTATCTTGTGCATCTGGAACTCAGGATAAGGCATCCTGGTGCAGGGATTCCTGAAGCACTGCTAGATCAAATGTATGGGGAGGATACAGATGCGTCTGTGGAGGGGATCAGCTTGGTTATAAGCAGAAAGCTGGTGAAGCTGATGAACGGAGATGTTCGGTACATGAGGGAAGCAGGGAAGTCGAGTTTTATCATATCAGTAGAGCTTGCTGGTGGCCATAAATCGCAAAAAAGGGCATGA
Protein:  
MSSSRPSHSSSNSARSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGLESEKVSFGFFARTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIRNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATSQVMMKSNEKGIRIINDAAEEMMAETLYGDSIRLQQVLADFLLMSVNFTPSGGLLTVSASFSKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMYGEDTDASVEGISLVISRKLVKLMNGDVRYMREAGKSSFIISVELAGGHKSQKRA